delta.lineage.CellFeatures#
- class delta.lineage.CellFeatures(new_pole, old_pole, length=0.0, width=0.0, area=0.0, perimeter=0.0, fluo=<factory>, edges='', growthrate_length=nan, growthrate_area=nan)[source]#
Container for cell features of a given cell at a given frame.
- __init__(new_pole, old_pole, length=0.0, width=0.0, area=0.0, perimeter=0.0, fluo=<factory>, edges='', growthrate_length=nan, growthrate_area=nan)[source]#
Methods
__init__
(new_pole, old_pole[, length, ...])swap_poles
()Swap the new and old poles of the cell, in place.
Attributes
area
Cell area, in square pixels.
edges
String describing image edges touched by the cell.
growthrate_area
Growth rate of the cell area, see documentation.
growthrate_length
Growth rate of the cell length, see documentation.
length
Cell length, in pixels.
perimeter
Cell perimeter length, in pixels.
width
Cell width, pixels.
new_pole
Location of "Young" cell pole created after division of the septum.
old_pole
Location of "Old" cell pole that is maintained at division
fluo
Average (mean) fluorescence level(s) within cell contour.