Index
_
|
B
|
C
|
D
|
E
|
F
|
G
|
H
|
I
|
J
|
K
|
L
|
M
|
N
|
O
|
P
|
R
|
S
|
T
|
U
|
V
|
W
|
X
|
Z
_
__init__() (delta.pipeline.Pipeline method)
,
[1]
(delta.pipeline.Position method)
,
[1]
(delta.pipeline.ROI method)
,
[1]
(delta.utilities.Cell method)
,
[1]
(delta.utilities.CroppingBox method)
,
[1]
(delta.utilities.files_watcher method)
,
[1]
(delta.utilities.Lineage method)
,
[1]
(delta.utilities.xpreader method)
,
[1]
B
binarizerange() (in module delta.data)
C
Cell (class in delta.utilities)
cell_area() (in module delta.utilities)
cell_fluo() (in module delta.utilities)
cell_perimeter() (in module delta.utilities)
cell_width_length() (in module delta.utilities)
class_weighted_categorical_crossentropy() (in module delta.model)
clear() (delta.pipeline.Position method)
(delta.utilities.Cell method)
(delta.utilities.CroppingBox method)
close() (delta.utilities.xpreader method)
contracting_block() (in module delta.model)
copy() (delta.utilities.Cell method)
(delta.utilities.CroppingBox method)
create_windows() (in module delta.utilities)
createcell() (delta.utilities.Lineage method)
crop_windows (in module delta.config)
cropbox() (in module delta.utilities)
CroppingBox (class in delta.utilities)
D
data_augmentation() (in module delta.data)
delta
module
delta.assets
module
delta.config
module
delta.data
module
delta.model
module
delta.pipeline
module
delta.utilities
module
deskew() (in module delta.utilities)
detect_rois() (delta.pipeline.Position method)
division_poles() (in module delta.utilities)
download_assets() (in module delta.assets)
drift_correction (in module delta.config)
driftcorr() (in module delta.utilities)
E
estimate_seg2D_classweights() (in module delta.data)
estimateClassweights() (in module delta.data)
eucl() (in module delta.utilities)
eval_movie (in module delta.config)
expanding_block() (in module delta.model)
extract_features() (delta.pipeline.ROI method)
extract_poles() (in module delta.utilities)
extrema_poles() (in module delta.utilities)
F
features() (delta.pipeline.Position method)
files_watcher (class in delta.utilities)
find_contours() (in module delta.utilities)
findfirst() (in module delta.utilities)
fromkeys() (delta.utilities.Cell method)
(delta.utilities.CroppingBox method)
G
get() (delta.utilities.Cell method)
(delta.utilities.CroppingBox method)
get_segmentation_inputs() (delta.pipeline.ROI method)
get_tracking_inputs() (delta.pipeline.ROI method)
getAttributions() (in module delta.utilities)
getcellsinframe() (in module delta.utilities)
getcentroid() (in module delta.utilities)
getDriftTemplate() (in module delta.utilities)
getfilenamefromprototype() (delta.utilities.xpreader method)
getfnfromprototype() (in module delta.data)
getframes() (delta.utilities.xpreader method)
getName() (delta.utilities.files_watcher method)
getpoles() (in module delta.utilities)
getrandomcolors() (in module delta.utilities)
getROIBoxes() (in module delta.utilities)
getshiftvalues() (in module delta.utilities)
gettrackingboxes() (in module delta.utilities)
getTrackingScores() (in module delta.utilities)
getvalue() (delta.utilities.Lineage method)
getxppathdialog() (in module delta.utilities)
H
histogram_voodoo() (in module delta.data)
I
illumination_voodoo() (in module delta.data)
image_edges() (in module delta.utilities)
imrotate() (in module delta.utilities)
is_alive() (delta.utilities.files_watcher method)
isDaemon() (delta.utilities.files_watcher method)
items() (delta.utilities.Cell method)
(delta.utilities.CroppingBox method)
J
join() (delta.utilities.files_watcher method)
K
kernel() (in module delta.data)
keys() (delta.utilities.Cell method)
(delta.utilities.CroppingBox method)
L
label_seg() (in module delta.utilities)
legacysave() (delta.pipeline.Position method)
Lineage (class in delta.utilities)
load() (delta.pipeline.Position method)
load_config() (in module delta.config)
load_position() (in module delta.pipeline)
loadmodels() (in module delta.utilities)
M
memory_growth_limit (in module delta.config)
min_cell_area (in module delta.config)
min_roi_area (in module delta.config)
model_file_rois (in module delta.config)
model_file_seg (in module delta.config)
model_file_track (in module delta.config)
models (in module delta.config)
module
delta
delta.assets
delta.config
delta.data
delta.model
delta.pipeline
delta.utilities
N
newfiles() (delta.utilities.files_watcher method)
O
opencv_areafilt() (in module delta.utilities)
P
Pipeline (class in delta.pipeline)
pipeline_seg_batch (in module delta.config)
pipeline_track_batch (in module delta.config)
pixelwise_weighted_binary_crossentropy_seg() (in module delta.model)
pixelwise_weighted_binary_crossentropy_track() (in module delta.model)
pop() (delta.utilities.Cell method)
(delta.utilities.CroppingBox method)
popitem() (delta.utilities.Cell method)
(delta.utilities.CroppingBox method)
Position (class in delta.pipeline)
postprocess() (in module delta.data)
predictCompilefromseg_track() (in module delta.data)
predictGenerator_seg() (in module delta.data)
preprocess() (delta.pipeline.Pipeline method)
(delta.pipeline.Position method)
presets (in module delta.config)
process() (delta.pipeline.Pipeline method)
process_segmentation_outputs() (delta.pipeline.ROI method)
process_tracking_outputs() (delta.pipeline.ROI method)
R
rangescale() (in module delta.utilities)
readreshape() (in module delta.data)
results_movie() (delta.pipeline.Position method)
ROI (class in delta.pipeline)
roi_features() (in module delta.utilities)
rotation_correction (in module delta.config)
run() (delta.pipeline.Pipeline method)
(delta.utilities.files_watcher method)
S
save() (delta.pipeline.Position method)
save_format (in module delta.config)
saveResult_seg() (in module delta.data)
saveResult_track() (in module delta.data)
seg_weights() (in module delta.data)
seg_weights_2D() (in module delta.data)
segment() (delta.pipeline.Position method)
setDaemon() (delta.utilities.files_watcher method)
setdefault() (delta.utilities.Cell method)
(delta.utilities.CroppingBox method)
setName() (delta.utilities.files_watcher method)
setvalue() (delta.utilities.Lineage method)
shift() (in module delta.data)
singlecell_features() (in module delta.utilities)
skeleton_poles() (in module delta.utilities)
start() (delta.utilities.files_watcher method)
stitch_pic() (in module delta.utilities)
T
target_size_rois (in module delta.config)
target_size_seg (in module delta.config)
target_size_track (in module delta.config)
TF_CPP_MIN_LOG_LEVEL (in module delta.config)
track() (delta.pipeline.Position method)
track_poles() (in module delta.utilities)
tracking_weights() (in module delta.data)
trainGenerator_seg() (in module delta.data)
trainGenerator_track() (in module delta.data)
training_set_rois (in module delta.config)
training_set_seg (in module delta.config)
training_set_track (in module delta.config)
two_poles() (in module delta.utilities)
U
unet() (in module delta.model)
unet_rois() (in module delta.model)
unet_seg() (in module delta.model)
unet_track() (in module delta.model)
unstack_acc() (in module delta.model)
update() (delta.utilities.Cell method)
(delta.utilities.CroppingBox method)
(delta.utilities.Lineage method)
updatecell() (delta.utilities.Lineage method)
V
values() (delta.utilities.Cell method)
(delta.utilities.CroppingBox method)
vidwrite() (in module delta.utilities)
W
whole_frame_drift (in module delta.config)
X
xpreader (class in delta.utilities)
Z
zoomshift() (in module delta.data)
DeLTA
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