delta.utilities.skeleton_poles

delta.utilities.skeleton_poles(skel: ndarray[Any, dtype[uint8]]) → ndarray[Any, dtype[bool]]

This function was adapted from stackoverflow #https://stackoverflow.com/questions/26537313/how-can-i-find-endpoints-of-binary-skeleton-image-in-opencv

It uses a kernel to filter out the poles

Parameters

skel2D numpy array of bool

Contains skeletons of single cells from the segmentation.

Returns

out2D numpy array of bool

Contains True at the poles of the skeletons from the input.