delta.utilities.getpoles

delta.utilities.getpoles(seg: numpy.ndarray[Any, numpy.dtype[numpy.uint8]], labels: Optional[numpy.ndarray[Any, numpy.dtype[numpy.uint16]]] = None, scaling: Optional[Tuple[float, float]] = None) → List[Tuple[numpy.ndarray[Any, numpy.dtype[numpy.uint16]], numpy.ndarray[Any, numpy.dtype[numpy.uint16]]]]

Get cell poles

Parameters

seg2D array of uint8

Cell segmentation mask.

labels2D array of int, optional

Cell labels map. If None, label_seg() will be applied to seg The default is None.

scalingtuple of floats, optional

Scaling to apply in both directions to rescale poles’ positions to original image size (if resizing was applied)

Returns

poleslist

List of poles per cell. Each cell in the list has exactly 2 poles.